dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001780_2|CGC2
Gene ID: MGYG000001780_00277
Location and strand information: 37041 - 38348 (-)
Family: GH88
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.4571
Protein molecular weight: 49430.54
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_2|CGC2
Gene ID: MGYG000001780_00278
Location and strand information: 38362 - 40398 (-)
Family: PL12|PL12_2
Protein type: CAZyme
Protein description: Heparin-sulfate lyase
Protein isoelectric point: 7.6386
Protein molecular weight: 78947.37
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_2|CGC2
Gene ID: MGYG000001780_00279
Location and strand information: 40487 - 41062 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001780_2|CGC2
Gene ID: MGYG000001780_00280
Location and strand information: 41075 - 42763 (-)
Family: null
Protein type: null
Protein description: SusD-like protein

Gene clsuter ID: MGYG000001780_2|CGC2
Gene ID: MGYG000001780_00281
Location and strand information: 42780 - 45899 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001780_2|CGC2
Gene ID: MGYG000001780_00282
Location and strand information: 45945 - 48446 (-)
Family: PL15
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.7054
Protein molecular weight: 96328.77
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_2|CGC2
Gene ID: MGYG000001780_00283
Location and strand information: 48499 - 51054 (-)
Family: PL15
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.6688
Protein molecular weight: 97933.29
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_2|CGC2
Gene ID: MGYG000001780_00284
Location and strand information: 51291 - 55343 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001780_2|CGC2
Gene ID: MGYG000001780_00285
Location and strand information: 55849 - 58059 (+)
Family: 3.A.7.7.1
Protein type: TC
Protein description: DNA topoisomerase 3

Gene clsuter ID: MGYG000001780_2|CGC2
Gene ID: MGYG000001780_00286
Location and strand information: 58133 - 60136 (+)
Family: 1.B.6.1.14
Protein type: TC
Protein description: hypothetical protein

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001780_00277	GH88_e23\|3.2.1.-	hostglycan
MGYG000001780_00278	PL12_e10\|4.2.2.8	hostglycan
MGYG000001780_00282	PL15_e3
MGYG000001780_00283

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is host glycan

Substrate predicted by dbCAN-PUL is glycosaminoglycan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001780_00277	hypothetical protein	CAZyme	37041	38348	-	GH88
MGYG000001780_00278	Heparin-sulfate lyase	CAZyme	38362	40398	-	PL12\| PL12_2
MGYG000001780_00279	hypothetical protein	null	40487	41062	-	No domain
MGYG000001780_00280	SusD-like protein	null	41075	42763	-	SusD-like_3\| SusD_RagB
MGYG000001780_00281	TonB-dependent receptor SusC	TC	42780	45899	-	1.B.14.6.1
MGYG000001780_00282	hypothetical protein	CAZyme	45945	48446	-	PL15
MGYG000001780_00283	hypothetical protein	CAZyme	48499	51054	-	PL15
MGYG000001780_00284	Sensor histidine kinase RcsC	TF	51291	55343	-	HTH_AraC
MGYG000001780_00285	DNA topoisomerase 3	TC	55849	58059	+	3.A.7.7.1
MGYG000001780_00286	hypothetical protein	TC	58133	60136	+	1.B.6.1.14
Protein ID	Protein Name	Type	Start	End	Strand	Signature